Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930500.1_cds_XP_016477519.1_69242
CDS Infomation

[gene=LOC107798981] [db_xref=GeneID:107798981] [protein=glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic] [protein_id=XP_016477519.1] [location=join(18539..18802,19607..19903,20196..20465,20559..20738,21106..21209,21309..21420,22381..22479,22704..22823,23022..23138)] [gbkey=CDS]
Sequence

ATGGCTTCCATTGGAGCCTTAAAATCTTCGCCTTCTCCCAAAAATTGCATCAATGAGAGA
AGAAATGATGCTACTCGTGCAATGTCCTTTCGAAACCTTTCCTTTTCGTCGTCTCATCTC
TCTGGAGACAAGCTAATGTCTATGGCAACCTTACATTCTCAGCAGCGCCATTCCAGCGAG
AGGAGGAGTCCACTGATCGTGTCGCCTAAGGCTGTTTCTGATTCACAGAATTCGCAGACA
TGTCTTGATCCTGATGCTAGCCGAAGTGTTTTGGGAATTATTCTTGGAGGTGGAGCTGGG
ACCCGACTTTATCCTCTAACTAAAAAAAGAGCAAAGCCAGCAGTTCCTCTTGGAGCAAAT
TATCGTCTGATTGACATTCCTGTAAGCAATTGCTTGAACAGTAACATATCCAAGATCTAT
GTTCTCACACAATTCAACTCTGCGTCTCTGAATCGACACCTTTCACGGGCATATGCTAGC
AACATGGGGGGATACAAAAATGAGGGTTTTGTGGAGGTTCTTGCTGCTCAACAAAGTCCG
GAGAACCCCAATTGGTTCCAGGGGACTGCTGATGCTGTCAGGCAGTATCTATGGTTGTTT
GAGGAGCATAATGTTCTTGAATTCCTCGTACTTGCTGGAGATCATCTATATCGAATGGAT
TATGAAAAGTTCATTCAAGCCCACAGAGAAACAGATGCTGATATTACTGTTGCCGCACTG
CCAATGGATGAAAAGCGAGCCACTGCATTTGGTCTCATGAAGATTGACGAAGAAGGACGC
ATTATTGAATTTGCAGAGAAACCGAAAGGAGAGCAATTGAAAGCAATGAAAGTGGATACT
ACCATTTTAGGTCTTGATGATGAGAGAGCTAAAGAGATGCCTTTTATCGCAAGTATGGGT
ATATATGTCATTAGCAAAGATGTGATGTTAAACCTACTTCGTGATAAGTTCCCTGGTGCC
AATGATTTTGGCAGTGAAGTTATTCCTGGTGCAACTTCGCTTGGGATGAGAGTGCAAGCT
TATTTATATGATGGATACTGGGAAGATATTGGTACCATCGAAGCTTTCTACAATGCCAAT
TTGGGCATTACCAAAAAGCCAGTCCCAGATTTTAGCTTCTATGACCGATCAGCTCCAATC
TACACCCAACCTCGATATCTGCCACCTTCAAAAATGCTTGATGCCGATGTCACAGACAGT
GTCATTGGTGAAGGTTGTGTGATCAAGAACTGTAAAATTCACCATTCTGTGGTTGGGCTC
AGATCATGCATATCAGAGGGAGCAATTATAGAAGACTCGCTTCTGATGGGGGCAGATTAT
TATGAGACTGATGCTGACAGGAGGTTCCTGGCTGCAAAGGGTAGTGTCCCAATTGGCATT
GGCAAGAACTCCCACATTAAAAGAGCCATTATTGACAAGAATGCCCGTATAGGGGACAAT
GTGAAGATCATTAACAGCGACAATGTTCAAGAAGCGGCTAGGGAAACGGATGGATACTTC
ATCAAGAGTGGGATTGTCACTGTTATCAAGGATGCATTGATTCCCAGTGGAATTATCATC
TAA

Peptide Sequence

PEP ID

XP_016477519.1
PEP Infomation

PREDICTED: glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic [Nicotiana tabacum]
Sequence

MASIGALKSSPSPKNCINERRNDATRAMSFRNLSFSSSHLSGDKLMSMATLHSQQRHSSE
RRSPLIVSPKAVSDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGAN
YRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSP
ENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYEKFIQAHRETDADITVAAL
PMDEKRATAFGLMKIDEEGRIIEFAEKPKGEQLKAMKVDTTILGLDDERAKEMPFIASMG
IYVISKDVMLNLLRDKFPGANDFGSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNAN
LGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGL
RSCISEGAIIEDSLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDN
VKIINSDNVQEAARETDGYFIKSGIVTVIKDALIPSGIII

Transcript Sequence

Gene sequence data has not been registered.